# dnarrange alns.maf

# group1-4
# 22367894+ chr12:11090<18271 chr2:113592597>113580021 chr9:38962<42163
#  chr9:42363<47763
# bc20f5f5+ chr12:10895<19397 chr1:19324<25540 chr2:113587861>113586378
# f7636412- chr12:10454<18338 chr2:113592006>113586243
# e1b74858+ chr2:113583527>113574549 chr9:38696<53379 chr9:53189<57945

# group2-3
# 49af0da4+ chr12:17844130<17860021 chr12:17769909>17745208
#  chr12:17745083>17744392 chr12:17744077>17741452 chr12:17741227>17739200
# 258d654b+ chr12:17840937<17859623 chr12:17770275>17765460
#  chr12:17765396>17750454
# 101f33d6- chr12:17842343<17843801 chr12:17845551<17845640
#  chr12:17846371<17850853 chr12:17853706<17855381 chr12:17768376>17765851
#  chr12:17765498>17764706 chr12:17761722>17761583 chr12:17752284>17748598
#  chr12:17748325>17748020 chr12:17743280>17742501 chr12:17740971>17740489
#  chr12:17736236>17735979 chr12:17735386>17733691

# group3-2
# 6a148bd9+ chr19:17558023>17557054 chr18:23830954<23831466
# bc511252- chr19:17558023>17557056 chr18:23830970<23831547

# group4-2
# 29e0013d+ chr8:53959151<53960488 chr18:24180248<24183714

# group5-2
# 460771d8+ chr6:99757506>99753772 chr18:24811681<24817899
# 72ad35f4- chr6:99757493>99756193 chr6:99756119>99753784
#  chr18:24811681<24812458 chr18:24812538<24817212

# group6-2
# 79443ae2+ chr19:37964408<37966684 chr18:30473104<30476840
# c46c5068- chr19:37964409<37965731 chr19:37965740<37966684
#  chr18:30473100<30476844

# group7-1
# xxx+ chr28:30476840>30473104 chr29:37966684>37964408
